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Cluster: HRGMv2_1590_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1590_14 HRGMv2_1590_14_10 9430 10806 - GH13_20
TC HRGMv2_1590_14 HRGMv2_1590_14_11 10961 12157 - 2.A.1.2.18
TC HRGMv2_1590_14 HRGMv2_1590_14_12 12279 14639 - 9.A.8.1.6
peptidase HRGMv2_1590_14 HRGMv2_1590_14_13 14824 15726 - S09.UPW
TC HRGMv2_1590_14 HRGMv2_1590_14_14 15970 16533 + 4.A.1.2.6
pfam HRGMv2_1590_14 HRGMv2_1590_14_15 16715 18118 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1590_14 HRGMv2_1590_14_16 18377 19162 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1590_14 HRGMv2_1590_14_17 19323 20303 + 3.A.1.34.1
TC HRGMv2_1590_14 HRGMv2_1590_14_18 20507 21430 + 3.A.1.34.1
TC HRGMv2_1590_14 HRGMv2_1590_14_19 21423 22217 + 3.A.1.34.1
Gene ID: HRGMv2_1590_14_10
Type: CAZyme
Location: 9430 - 10806 (-)
Gene ID: HRGMv2_1590_14_11
Type: TC
Location: 10961 - 12157 (-)
Gene ID: HRGMv2_1590_14_12
Type: TC
Location: 12279 - 14639 (-)
Gene ID: HRGMv2_1590_14_13
Type: peptidase
Location: 14824 - 15726 (-)
Gene ID: HRGMv2_1590_14_14
Type: TC
Location: 15970 - 16533 (+)
Gene ID: HRGMv2_1590_14_15
Type: pfam
Location: 16715 - 18118 (+)
Gene ID: HRGMv2_1590_14_16
Type:
Location: 18377 - 19162 (+)
Gene ID: HRGMv2_1590_14_17
Type: TC
Location: 19323 - 20303 (+)
Gene ID: HRGMv2_1590_14_18
Type: TC
Location: 20507 - 21430 (+)
Gene ID: HRGMv2_1590_14_19
Type: TC
Location: 21423 - 22217 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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