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Cluster: HRGMv2_1590_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1590_6 HRGMv2_1590_6_3 2745 4250 + GH77
CAZyme HRGMv2_1590_6 HRGMv2_1590_6_4 4380 6647 + GT35
TC HRGMv2_1590_6 HRGMv2_1590_6_5 7182 8381 - 3.A.1.1.22
TC HRGMv2_1590_6 HRGMv2_1590_6_6 8450 9289 - 3.A.1.1.45
TC HRGMv2_1590_6 HRGMv2_1590_6_7 9289 10143 - 3.A.1.1.45
TC HRGMv2_1590_6 HRGMv2_1590_6_8 10231 11547 - 3.A.1.1.45
TF HRGMv2_1590_6 HRGMv2_1590_6_9 11854 12573 - GntR
TC HRGMv2_1590_6 HRGMv2_1590_6_10 12803 15253 + 4.A.1.1.8
Gene ID: HRGMv2_1590_6_3
Type: CAZyme
Location: 2745 - 4250 (+)
Gene ID: HRGMv2_1590_6_4
Type: CAZyme
Location: 4380 - 6647 (+)
Gene ID: HRGMv2_1590_6_5
Type: TC
Location: 7182 - 8381 (-)
Gene ID: HRGMv2_1590_6_6
Type: TC
Location: 8450 - 9289 (-)
Gene ID: HRGMv2_1590_6_7
Type: TC
Location: 9289 - 10143 (-)
Gene ID: HRGMv2_1590_6_8
Type: TC
Location: 10231 - 11547 (-)
Gene ID: HRGMv2_1590_6_9
Type: TF
Location: 11854 - 12573 (-)
Gene ID: HRGMv2_1590_6_10
Type: TC
Location: 12803 - 15253 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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