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Cluster: HRGMv2_1590_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1590_44 HRGMv2_1590_44_4 5350 6909 + 2.A.2.5.1
CAZyme HRGMv2_1590_44 HRGMv2_1590_44_5 7025 8620 + GH28
peptidase HRGMv2_1590_44 HRGMv2_1590_44_6 8725 9534 + S09.UPW
CAZyme HRGMv2_1590_44 HRGMv2_1590_44_7 9531 11720 + CE19 | CE8
pfam HRGMv2_1590_44 HRGMv2_1590_44_8 11768 12436 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_1590_44 HRGMv2_1590_44_9 12544 13782 + GH105
Gene ID: HRGMv2_1590_44_4
Type: TC
Location: 5350 - 6909 (+)
Gene ID: HRGMv2_1590_44_5
Type: CAZyme
Location: 7025 - 8620 (+)
Gene ID: HRGMv2_1590_44_6
Type: peptidase
Location: 8725 - 9534 (+)
Gene ID: HRGMv2_1590_44_7
Type: CAZyme
Location: 9531 - 11720 (+)
Gene ID: HRGMv2_1590_44_8
Type: pfam
Location: 11768 - 12436 (+)
Gene ID: HRGMv2_1590_44_9
Type: CAZyme
Location: 12544 - 13782 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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