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Cluster: HRGMv2_1590_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1590_35 HRGMv2_1590_35_5 2176 4518 - 3.A.3.5.15
STP HRGMv2_1590_35 HRGMv2_1590_35_6 5090 7174 - Pkinase
STP HRGMv2_1590_35 HRGMv2_1590_35_7 7346 8308 - FHA
TC HRGMv2_1590_35 HRGMv2_1590_35_8 8897 11155 + 1.I.1.1.3
STP HRGMv2_1590_35 HRGMv2_1590_35_9 11777 12538 + Fer4
TC HRGMv2_1590_35 HRGMv2_1590_35_10 13019 13393 + 4.A.1.2.5
pfam HRGMv2_1590_35 HRGMv2_1590_35_11 13400 14266 + PRD | PRD | CAT_RBD
TC HRGMv2_1590_35 HRGMv2_1590_35_12 14366 15982 + 4.A.1.1.3
CAZyme HRGMv2_1590_35 HRGMv2_1590_35_13 15986 17368 + GH4
Gene ID: HRGMv2_1590_35_5
Type: TC
Location: 2176 - 4518 (-)
Gene ID: HRGMv2_1590_35_6
Type: STP
Location: 5090 - 7174 (-)
Gene ID: HRGMv2_1590_35_7
Type: STP
Location: 7346 - 8308 (-)
Gene ID: HRGMv2_1590_35_8
Type: TC
Location: 8897 - 11155 (+)
Gene ID: HRGMv2_1590_35_9
Type: STP
Location: 11777 - 12538 (+)
Gene ID: HRGMv2_1590_35_10
Type: TC
Location: 13019 - 13393 (+)
Gene ID: HRGMv2_1590_35_11
Type: pfam
Location: 13400 - 14266 (+)
Gene ID: HRGMv2_1590_35_12
Type: TC
Location: 14366 - 15982 (+)
Gene ID: HRGMv2_1590_35_13
Type: CAZyme
Location: 15986 - 17368 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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