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Cluster: HRGMv2_1589_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1589_22 HRGMv2_1589_22_6 8856 10250 - 2.A.1.2.93
STP HRGMv2_1589_22 HRGMv2_1589_22_7 10475 11134 + TetR_N
CAZyme HRGMv2_1589_22 HRGMv2_1589_22_8 11213 12526 - GH140
TC HRGMv2_1589_22 HRGMv2_1589_22_9 12734 14161 - 4.A.1.2.11
peptidase HRGMv2_1589_22 HRGMv2_1589_22_10 14651 15988 + S09.UPW
pfam HRGMv2_1589_22 HRGMv2_1589_22_11 16251 17762 + Sde182_NH-like
CAZyme HRGMv2_1589_22 HRGMv2_1589_22_12 18035 19465 - GH1
pfam HRGMv2_1589_22 HRGMv2_1589_22_13 19820 20464 - DUF4867
peptidase HRGMv2_1589_22 HRGMv2_1589_22_14 20588 21568 - S09.UPC
TC HRGMv2_1589_22 HRGMv2_1589_22_15 21674 23044 - 4.A.1.2.6
Gene ID: HRGMv2_1589_22_6
Type: TC
Location: 8856 - 10250 (-)
Gene ID: HRGMv2_1589_22_7
Type: STP
Location: 10475 - 11134 (+)
Gene ID: HRGMv2_1589_22_8
Type: CAZyme
Location: 11213 - 12526 (-)
Gene ID: HRGMv2_1589_22_9
Type: TC
Location: 12734 - 14161 (-)
Gene ID: HRGMv2_1589_22_10
Type: peptidase
Location: 14651 - 15988 (+)
Gene ID: HRGMv2_1589_22_11
Type: pfam
Location: 16251 - 17762 (+)
Gene ID: HRGMv2_1589_22_12
Type: CAZyme
Location: 18035 - 19465 (-)
Gene ID: HRGMv2_1589_22_13
Type: pfam
Location: 19820 - 20464 (-)
Gene ID: HRGMv2_1589_22_14
Type: peptidase
Location: 20588 - 21568 (-)
Gene ID: HRGMv2_1589_22_15
Type: TC
Location: 21674 - 23044 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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