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Cluster: HRGMv2_1587_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1587_18 HRGMv2_1587_18_29 27574 29079 + GH77
CAZyme HRGMv2_1587_18 HRGMv2_1587_18_30 29208 31475 + GT35
TC HRGMv2_1587_18 HRGMv2_1587_18_31 31932 33131 - 3.A.1.1.22
TC HRGMv2_1587_18 HRGMv2_1587_18_32 33200 34039 - 3.A.1.1.45
TC HRGMv2_1587_18 HRGMv2_1587_18_33 34039 34893 - 3.A.1.1.45
TC HRGMv2_1587_18 HRGMv2_1587_18_34 34981 36297 - 3.A.1.1.45
TF HRGMv2_1587_18 HRGMv2_1587_18_35 36604 37323 - GntR
TC HRGMv2_1587_18 HRGMv2_1587_18_36 37551 40001 + 4.A.1.1.8
Gene ID: HRGMv2_1587_18_29
Type: CAZyme
Location: 27574 - 29079 (+)
Gene ID: HRGMv2_1587_18_30
Type: CAZyme
Location: 29208 - 31475 (+)
Gene ID: HRGMv2_1587_18_31
Type: TC
Location: 31932 - 33131 (-)
Gene ID: HRGMv2_1587_18_32
Type: TC
Location: 33200 - 34039 (-)
Gene ID: HRGMv2_1587_18_33
Type: TC
Location: 34039 - 34893 (-)
Gene ID: HRGMv2_1587_18_34
Type: TC
Location: 34981 - 36297 (-)
Gene ID: HRGMv2_1587_18_35
Type: TF
Location: 36604 - 37323 (-)
Gene ID: HRGMv2_1587_18_36
Type: TC
Location: 37551 - 40001 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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