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Cluster: HRGMv2_1584_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1584_23 HRGMv2_1584_23_9 7694 8578 - CE7
TC HRGMv2_1584_23 HRGMv2_1584_23_10 8752 9579 - 3.A.1.5.27
TC HRGMv2_1584_23 HRGMv2_1584_23_11 9580 11595 - 3.A.1.5.25
TC HRGMv2_1584_23 HRGMv2_1584_23_12 11599 12555 - 3.A.1.5.38
TC HRGMv2_1584_23 HRGMv2_1584_23_13 12713 14326 - 3.A.1.5.27
pfam HRGMv2_1584_23 HRGMv2_1584_23_14 14692 16632 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1584_23 HRGMv2_1584_23_15 16639 18321 - 2.A.66.4.4
Gene ID: HRGMv2_1584_23_9
Type: CAZyme
Location: 7694 - 8578 (-)
Gene ID: HRGMv2_1584_23_10
Type: TC
Location: 8752 - 9579 (-)
Gene ID: HRGMv2_1584_23_11
Type: TC
Location: 9580 - 11595 (-)
Gene ID: HRGMv2_1584_23_12
Type: TC
Location: 11599 - 12555 (-)
Gene ID: HRGMv2_1584_23_13
Type: TC
Location: 12713 - 14326 (-)
Gene ID: HRGMv2_1584_23_14
Type: pfam
Location: 14692 - 16632 (-)
Gene ID: HRGMv2_1584_23_15
Type: TC
Location: 16639 - 18321 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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