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Cluster: HRGMv2_1584_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1584_17 HRGMv2_1584_17_7 5074 7416 - 3.A.3.5.15
STP HRGMv2_1584_17 HRGMv2_1584_17_8 7747 9831 - Pkinase
STP HRGMv2_1584_17 HRGMv2_1584_17_9 10003 10965 - FHA
TC HRGMv2_1584_17 HRGMv2_1584_17_10 11546 13795 + 1.I.1.1.3
STP HRGMv2_1584_17 HRGMv2_1584_17_11 14414 15175 + Fer4
TC HRGMv2_1584_17 HRGMv2_1584_17_12 15519 16031 + 4.A.1.2.5
pfam HRGMv2_1584_17 HRGMv2_1584_17_13 16038 16904 + PRD | PRD | CAT_RBD
TC HRGMv2_1584_17 HRGMv2_1584_17_14 17004 18620 + 4.A.1.1.3
CAZyme HRGMv2_1584_17 HRGMv2_1584_17_15 18624 20006 + GH4
STP HRGMv2_1584_17 HRGMv2_1584_17_16 20263 22095 + Pyr_redox_2
TC HRGMv2_1584_17 HRGMv2_1584_17_17 22089 23900 + 3.D.1.5.1
NULL(UNKNOWN) HRGMv2_1584_17 HRGMv2_1584_17_18 23903 24958 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1584_17 HRGMv2_1584_17_19 24962 26338 + 3.A.1.15.7
Gene ID: HRGMv2_1584_17_7
Type: TC
Location: 5074 - 7416 (-)
Gene ID: HRGMv2_1584_17_8
Type: STP
Location: 7747 - 9831 (-)
Gene ID: HRGMv2_1584_17_9
Type: STP
Location: 10003 - 10965 (-)
Gene ID: HRGMv2_1584_17_10
Type: TC
Location: 11546 - 13795 (+)
Gene ID: HRGMv2_1584_17_11
Type: STP
Location: 14414 - 15175 (+)
Gene ID: HRGMv2_1584_17_12
Type: TC
Location: 15519 - 16031 (+)
Gene ID: HRGMv2_1584_17_13
Type: pfam
Location: 16038 - 16904 (+)
Gene ID: HRGMv2_1584_17_14
Type: TC
Location: 17004 - 18620 (+)
Gene ID: HRGMv2_1584_17_15
Type: CAZyme
Location: 18624 - 20006 (+)
Gene ID: HRGMv2_1584_17_16
Type: STP
Location: 20263 - 22095 (+)
Gene ID: HRGMv2_1584_17_17
Type: TC
Location: 22089 - 23900 (+)
Gene ID: HRGMv2_1584_17_18
Type:
Location: 23903 - 24958 (+)
Gene ID: HRGMv2_1584_17_19
Type: TC
Location: 24962 - 26338 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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