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Cluster: HRGMv2_1584_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1584_2 HRGMv2_1584_2_33 37438 37776 - 4.A.3.1.2
TF HRGMv2_1584_2 HRGMv2_1584_2_34 37991 38995 - LacI
TC HRGMv2_1584_2 HRGMv2_1584_2_35 39352 41121 + 4.A.3.1.1
CAZyme HRGMv2_1584_2 HRGMv2_1584_2_36 41188 42627 + GH1
TF HRGMv2_1584_2 HRGMv2_1584_2_37 42963 43973 - LacI
TC HRGMv2_1584_2 HRGMv2_1584_2_38 44249 46033 + 4.A.3.1.1
CAZyme HRGMv2_1584_2 HRGMv2_1584_2_39 46109 47530 + GH1
TF HRGMv2_1584_2 HRGMv2_1584_2_40 47726 48490 - HTH_DeoR
sulfatase HRGMv2_1584_2 HRGMv2_1584_2_41 48697 49749 + S1_4
TC HRGMv2_1584_2 HRGMv2_1584_2_42 50075 50557 - 4.A.6.1.5
Gene ID: HRGMv2_1584_2_33
Type: TC
Location: 37438 - 37776 (-)
Gene ID: HRGMv2_1584_2_34
Type: TF
Location: 37991 - 38995 (-)
Gene ID: HRGMv2_1584_2_35
Type: TC
Location: 39352 - 41121 (+)
Gene ID: HRGMv2_1584_2_36
Type: CAZyme
Location: 41188 - 42627 (+)
Gene ID: HRGMv2_1584_2_37
Type: TF
Location: 42963 - 43973 (-)
Gene ID: HRGMv2_1584_2_38
Type: TC
Location: 44249 - 46033 (+)
Gene ID: HRGMv2_1584_2_39
Type: CAZyme
Location: 46109 - 47530 (+)
Gene ID: HRGMv2_1584_2_40
Type: TF
Location: 47726 - 48490 (-)
Gene ID: HRGMv2_1584_2_41
Type: sulfatase
Location: 48697 - 49749 (+)
Gene ID: HRGMv2_1584_2_42
Type: TC
Location: 50075 - 50557 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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