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Cluster: HRGMv2_1584_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1584_29 HRGMv2_1584_29_4 3229 4734 + GH77
CAZyme HRGMv2_1584_29 HRGMv2_1584_29_5 4863 7130 + GT35
TC HRGMv2_1584_29 HRGMv2_1584_29_6 7587 8786 - 3.A.1.1.22
TC HRGMv2_1584_29 HRGMv2_1584_29_7 8854 9693 - 3.A.1.1.45
TC HRGMv2_1584_29 HRGMv2_1584_29_8 9693 10547 - 3.A.1.1.45
TC HRGMv2_1584_29 HRGMv2_1584_29_9 10635 11951 - 3.A.1.1.45
TF HRGMv2_1584_29 HRGMv2_1584_29_10 12258 12977 - GntR
TC HRGMv2_1584_29 HRGMv2_1584_29_11 13205 15655 + 4.A.1.1.8
Gene ID: HRGMv2_1584_29_4
Type: CAZyme
Location: 3229 - 4734 (+)
Gene ID: HRGMv2_1584_29_5
Type: CAZyme
Location: 4863 - 7130 (+)
Gene ID: HRGMv2_1584_29_6
Type: TC
Location: 7587 - 8786 (-)
Gene ID: HRGMv2_1584_29_7
Type: TC
Location: 8854 - 9693 (-)
Gene ID: HRGMv2_1584_29_8
Type: TC
Location: 9693 - 10547 (-)
Gene ID: HRGMv2_1584_29_9
Type: TC
Location: 10635 - 11951 (-)
Gene ID: HRGMv2_1584_29_10
Type: TF
Location: 12258 - 12977 (-)
Gene ID: HRGMv2_1584_29_11
Type: TC
Location: 13205 - 15655 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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