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Cluster: HRGMv2_1583_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1583_11 HRGMv2_1583_11_2 416 1504 - 3.D.1.4.2
pfam HRGMv2_1583_11 HRGMv2_1583_11_3 1510 2226 - Complex1_30kDa
TC HRGMv2_1583_11 HRGMv2_1583_11_4 2226 2819 - 3.D.1.4.2
TC HRGMv2_1583_11 HRGMv2_1583_11_5 2832 5714 - 3.D.1.4.2
TF HRGMv2_1583_11 HRGMv2_1583_11_6 6002 6397 - 0039939
STP HRGMv2_1583_11 HRGMv2_1583_11_7 6847 8877 - Pyr_redox_2
TC HRGMv2_1583_11 HRGMv2_1583_11_8 9912 11474 + 4.A.1.1.16
NULL(UNKNOWN) HRGMv2_1583_11 HRGMv2_1583_11_9 11513 11782 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1583_11 HRGMv2_1583_11_10 11802 13130 + GH4
Gene ID: HRGMv2_1583_11_2
Type: TC
Location: 416 - 1504 (-)
Gene ID: HRGMv2_1583_11_3
Type: pfam
Location: 1510 - 2226 (-)
Gene ID: HRGMv2_1583_11_4
Type: TC
Location: 2226 - 2819 (-)
Gene ID: HRGMv2_1583_11_5
Type: TC
Location: 2832 - 5714 (-)
Gene ID: HRGMv2_1583_11_6
Type: TF
Location: 6002 - 6397 (-)
Gene ID: HRGMv2_1583_11_7
Type: STP
Location: 6847 - 8877 (-)
Gene ID: HRGMv2_1583_11_8
Type: TC
Location: 9912 - 11474 (+)
Gene ID: HRGMv2_1583_11_9
Type:
Location: 11513 - 11782 (+)
Gene ID: HRGMv2_1583_11_10
Type: CAZyme
Location: 11802 - 13130 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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