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Cluster: HRGMv2_1583_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1583_8 HRGMv2_1583_8_20 23536 24912 - GH13_20
TC HRGMv2_1583_8 HRGMv2_1583_8_21 25275 26471 - 2.A.1.2.18
TC HRGMv2_1583_8 HRGMv2_1583_8_22 26596 28956 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1583_8 HRGMv2_1583_8_23 29078 29398 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1583_8 HRGMv2_1583_8_24 29446 30345 - S09.UPW
TC HRGMv2_1583_8 HRGMv2_1583_8_25 30588 31151 + 4.A.1.2.6
pfam HRGMv2_1583_8 HRGMv2_1583_8_26 31332 32735 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1583_8 HRGMv2_1583_8_27 32994 33779 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1583_8 HRGMv2_1583_8_28 33940 34920 + 3.A.1.34.1
TC HRGMv2_1583_8 HRGMv2_1583_8_29 35125 36048 + 3.A.1.34.1
TC HRGMv2_1583_8 HRGMv2_1583_8_30 36041 36835 + 3.A.1.34.1
Gene ID: HRGMv2_1583_8_20
Type: CAZyme
Location: 23536 - 24912 (-)
Gene ID: HRGMv2_1583_8_21
Type: TC
Location: 25275 - 26471 (-)
Gene ID: HRGMv2_1583_8_22
Type: TC
Location: 26596 - 28956 (-)
Gene ID: HRGMv2_1583_8_23
Type:
Location: 29078 - 29398 (-)
Gene ID: HRGMv2_1583_8_24
Type: peptidase
Location: 29446 - 30345 (-)
Gene ID: HRGMv2_1583_8_25
Type: TC
Location: 30588 - 31151 (+)
Gene ID: HRGMv2_1583_8_26
Type: pfam
Location: 31332 - 32735 (+)
Gene ID: HRGMv2_1583_8_27
Type:
Location: 32994 - 33779 (+)
Gene ID: HRGMv2_1583_8_28
Type: TC
Location: 33940 - 34920 (+)
Gene ID: HRGMv2_1583_8_29
Type: TC
Location: 35125 - 36048 (+)
Gene ID: HRGMv2_1583_8_30
Type: TC
Location: 36041 - 36835 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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