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Cluster: HRGMv2_1583_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1583_2 HRGMv2_1583_2_10 13577 15259 + 2.A.66.4.4
pfam HRGMv2_1583_2 HRGMv2_1583_2_11 15266 17206 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1583_2 HRGMv2_1583_2_12 17570 19183 + 3.A.1.5.27
TC HRGMv2_1583_2 HRGMv2_1583_2_13 19341 20297 + 3.A.1.5.38
TC HRGMv2_1583_2 HRGMv2_1583_2_14 20301 22316 + 3.A.1.5.25
TC HRGMv2_1583_2 HRGMv2_1583_2_15 22317 23144 + 3.A.1.5.27
CAZyme HRGMv2_1583_2 HRGMv2_1583_2_16 23318 24202 + CE7
Gene ID: HRGMv2_1583_2_10
Type: TC
Location: 13577 - 15259 (+)
Gene ID: HRGMv2_1583_2_11
Type: pfam
Location: 15266 - 17206 (+)
Gene ID: HRGMv2_1583_2_12
Type: TC
Location: 17570 - 19183 (+)
Gene ID: HRGMv2_1583_2_13
Type: TC
Location: 19341 - 20297 (+)
Gene ID: HRGMv2_1583_2_14
Type: TC
Location: 20301 - 22316 (+)
Gene ID: HRGMv2_1583_2_15
Type: TC
Location: 22317 - 23144 (+)
Gene ID: HRGMv2_1583_2_16
Type: CAZyme
Location: 23318 - 24202 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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