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Cluster: HRGMv2_1583_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1583_40 HRGMv2_1583_40_1 3 1460 + GH77
CAZyme HRGMv2_1583_40 HRGMv2_1583_40_2 1591 3858 + GT35
TC HRGMv2_1583_40 HRGMv2_1583_40_3 4234 5433 - 3.A.1.1.22
TC HRGMv2_1583_40 HRGMv2_1583_40_4 5501 6340 - 3.A.1.1.45
TC HRGMv2_1583_40 HRGMv2_1583_40_5 6340 7194 - 3.A.1.1.45
TC HRGMv2_1583_40 HRGMv2_1583_40_6 7282 8598 - 3.A.1.1.45
TF HRGMv2_1583_40 HRGMv2_1583_40_7 8905 9624 - GntR
NULL(UNKNOWN) HRGMv2_1583_40 HRGMv2_1583_40_8 9708 9827 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1583_40 HRGMv2_1583_40_9 9849 10229 + 4.A.1.1.8
Gene ID: HRGMv2_1583_40_1
Type: CAZyme
Location: 3 - 1460 (+)
Gene ID: HRGMv2_1583_40_2
Type: CAZyme
Location: 1591 - 3858 (+)
Gene ID: HRGMv2_1583_40_3
Type: TC
Location: 4234 - 5433 (-)
Gene ID: HRGMv2_1583_40_4
Type: TC
Location: 5501 - 6340 (-)
Gene ID: HRGMv2_1583_40_5
Type: TC
Location: 6340 - 7194 (-)
Gene ID: HRGMv2_1583_40_6
Type: TC
Location: 7282 - 8598 (-)
Gene ID: HRGMv2_1583_40_7
Type: TF
Location: 8905 - 9624 (-)
Gene ID: HRGMv2_1583_40_8
Type:
Location: 9708 - 9827 (-)
Gene ID: HRGMv2_1583_40_9
Type: TC
Location: 9849 - 10229 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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