dbCAN Logo

Cluster: HRGMv2_1583_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1583_12 HRGMv2_1583_12_31 33682 36024 - 3.A.3.5.15
STP HRGMv2_1583_12 HRGMv2_1583_12_32 36356 38440 - Pkinase
STP HRGMv2_1583_12 HRGMv2_1583_12_33 38612 39574 - FHA
TC HRGMv2_1583_12 HRGMv2_1583_12_34 40173 42404 + 1.I.1.1.3
NULL(UNKNOWN) HRGMv2_1583_12 HRGMv2_1583_12_35 43028 43789 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1583_12 HRGMv2_1583_12_36 44133 44645 + 4.A.1.2.5
pfam HRGMv2_1583_12 HRGMv2_1583_12_37 44664 45518 + PRD | PRD | CAT_RBD
TC HRGMv2_1583_12 HRGMv2_1583_12_38 45618 47234 + 4.A.1.1.3
CAZyme HRGMv2_1583_12 HRGMv2_1583_12_39 47238 48620 + GH4
Gene ID: HRGMv2_1583_12_31
Type: TC
Location: 33682 - 36024 (-)
Gene ID: HRGMv2_1583_12_32
Type: STP
Location: 36356 - 38440 (-)
Gene ID: HRGMv2_1583_12_33
Type: STP
Location: 38612 - 39574 (-)
Gene ID: HRGMv2_1583_12_34
Type: TC
Location: 40173 - 42404 (+)
Gene ID: HRGMv2_1583_12_35
Type:
Location: 43028 - 43789 (+)
Gene ID: HRGMv2_1583_12_36
Type: TC
Location: 44133 - 44645 (+)
Gene ID: HRGMv2_1583_12_37
Type: pfam
Location: 44664 - 45518 (+)
Gene ID: HRGMv2_1583_12_38
Type: TC
Location: 45618 - 47234 (+)
Gene ID: HRGMv2_1583_12_39
Type: CAZyme
Location: 47238 - 48620 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List