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Cluster: HRGMv2_1582_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1582_9 HRGMv2_1582_9_19 21508 22434 - CE7
TC HRGMv2_1582_9 HRGMv2_1582_9_20 22566 23393 - 3.A.1.5.27
TC HRGMv2_1582_9 HRGMv2_1582_9_21 23394 25409 - 3.A.1.5.25
TC HRGMv2_1582_9 HRGMv2_1582_9_22 25413 26369 - 3.A.1.5.38
TC HRGMv2_1582_9 HRGMv2_1582_9_23 26527 28140 - 3.A.1.5.27
pfam HRGMv2_1582_9 HRGMv2_1582_9_24 28506 30446 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1582_9 HRGMv2_1582_9_25 30453 32135 - 2.A.66.4.4
Gene ID: HRGMv2_1582_9_19
Type: CAZyme
Location: 21508 - 22434 (-)
Gene ID: HRGMv2_1582_9_20
Type: TC
Location: 22566 - 23393 (-)
Gene ID: HRGMv2_1582_9_21
Type: TC
Location: 23394 - 25409 (-)
Gene ID: HRGMv2_1582_9_22
Type: TC
Location: 25413 - 26369 (-)
Gene ID: HRGMv2_1582_9_23
Type: TC
Location: 26527 - 28140 (-)
Gene ID: HRGMv2_1582_9_24
Type: pfam
Location: 28506 - 30446 (-)
Gene ID: HRGMv2_1582_9_25
Type: TC
Location: 30453 - 32135 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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