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Cluster: HRGMv2_1582_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1582_29 HRGMv2_1582_29_15 14153 15658 + GH77
CAZyme HRGMv2_1582_29 HRGMv2_1582_29_16 15787 18054 + GT35
TC HRGMv2_1582_29 HRGMv2_1582_29_17 18511 19710 - 3.A.1.1.22
TC HRGMv2_1582_29 HRGMv2_1582_29_18 19778 20617 - 3.A.1.1.45
TC HRGMv2_1582_29 HRGMv2_1582_29_19 20617 21471 - 3.A.1.1.45
TC HRGMv2_1582_29 HRGMv2_1582_29_20 21559 22875 - 3.A.1.1.45
TF HRGMv2_1582_29 HRGMv2_1582_29_21 23182 23901 - GntR
NULL(UNKNOWN) HRGMv2_1582_29 HRGMv2_1582_29_22 23985 24104 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1582_29 HRGMv2_1582_29_23 24126 26576 + 4.A.1.1.8
Gene ID: HRGMv2_1582_29_15
Type: CAZyme
Location: 14153 - 15658 (+)
Gene ID: HRGMv2_1582_29_16
Type: CAZyme
Location: 15787 - 18054 (+)
Gene ID: HRGMv2_1582_29_17
Type: TC
Location: 18511 - 19710 (-)
Gene ID: HRGMv2_1582_29_18
Type: TC
Location: 19778 - 20617 (-)
Gene ID: HRGMv2_1582_29_19
Type: TC
Location: 20617 - 21471 (-)
Gene ID: HRGMv2_1582_29_20
Type: TC
Location: 21559 - 22875 (-)
Gene ID: HRGMv2_1582_29_21
Type: TF
Location: 23182 - 23901 (-)
Gene ID: HRGMv2_1582_29_22
Type:
Location: 23985 - 24104 (-)
Gene ID: HRGMv2_1582_29_23
Type: TC
Location: 24126 - 26576 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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