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Cluster: HRGMv2_1582_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1582_26 HRGMv2_1582_26_8 7581 8375 - 3.A.1.34.1
TC HRGMv2_1582_26 HRGMv2_1582_26_9 8368 9291 - 3.A.1.34.1
TC HRGMv2_1582_26 HRGMv2_1582_26_10 9496 10476 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1582_26 HRGMv2_1582_26_11 10638 11423 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1582_26 HRGMv2_1582_26_12 11673 13076 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1582_26 HRGMv2_1582_26_13 13258 13821 - 4.A.1.2.6
peptidase HRGMv2_1582_26 HRGMv2_1582_26_14 14066 14965 + S09.UPW
NULL(UNKNOWN) HRGMv2_1582_26 HRGMv2_1582_26_15 15013 15333 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1582_26 HRGMv2_1582_26_16 15455 17815 + 9.A.8.1.6
TC HRGMv2_1582_26 HRGMv2_1582_26_17 17937 19133 + 2.A.1.2.18
CAZyme HRGMv2_1582_26 HRGMv2_1582_26_18 19316 20692 + GH13_20
pfam HRGMv2_1582_26 HRGMv2_1582_26_19 20696 21256 + UDG
TF HRGMv2_1582_26 HRGMv2_1582_26_20 21554 22567 - HTH_AraC
TC HRGMv2_1582_26 HRGMv2_1582_26_21 22935 23255 + 4.A.1.2.6
TC HRGMv2_1582_26 HRGMv2_1582_26_22 23287 24354 + 4.A.1.2.2
CAZyme HRGMv2_1582_26 HRGMv2_1582_26_23 24460 25872 + GH2
Gene ID: HRGMv2_1582_26_8
Type: TC
Location: 7581 - 8375 (-)
Gene ID: HRGMv2_1582_26_9
Type: TC
Location: 8368 - 9291 (-)
Gene ID: HRGMv2_1582_26_10
Type: TC
Location: 9496 - 10476 (-)
Gene ID: HRGMv2_1582_26_11
Type:
Location: 10638 - 11423 (-)
Gene ID: HRGMv2_1582_26_12
Type: pfam
Location: 11673 - 13076 (-)
Gene ID: HRGMv2_1582_26_13
Type: TC
Location: 13258 - 13821 (-)
Gene ID: HRGMv2_1582_26_14
Type: peptidase
Location: 14066 - 14965 (+)
Gene ID: HRGMv2_1582_26_15
Type:
Location: 15013 - 15333 (+)
Gene ID: HRGMv2_1582_26_16
Type: TC
Location: 15455 - 17815 (+)
Gene ID: HRGMv2_1582_26_17
Type: TC
Location: 17937 - 19133 (+)
Gene ID: HRGMv2_1582_26_18
Type: CAZyme
Location: 19316 - 20692 (+)
Gene ID: HRGMv2_1582_26_19
Type: pfam
Location: 20696 - 21256 (+)
Gene ID: HRGMv2_1582_26_20
Type: TF
Location: 21554 - 22567 (-)
Gene ID: HRGMv2_1582_26_21
Type: TC
Location: 22935 - 23255 (+)
Gene ID: HRGMv2_1582_26_22
Type: TC
Location: 23287 - 24354 (+)
Gene ID: HRGMv2_1582_26_23
Type: CAZyme
Location: 24460 - 25872 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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