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Cluster: HRGMv2_1581_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1581_26 HRGMv2_1581_26_12 11180 12106 - CE7
TC HRGMv2_1581_26 HRGMv2_1581_26_13 12238 13065 - 3.A.1.5.27
TC HRGMv2_1581_26 HRGMv2_1581_26_14 13066 15081 - 3.A.1.5.25
TC HRGMv2_1581_26 HRGMv2_1581_26_15 15085 16041 - 3.A.1.5.38
TC HRGMv2_1581_26 HRGMv2_1581_26_16 16199 17812 - 3.A.1.5.27
pfam HRGMv2_1581_26 HRGMv2_1581_26_17 18178 20118 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1581_26 HRGMv2_1581_26_18 20125 21807 - 2.A.66.4.4
Gene ID: HRGMv2_1581_26_12
Type: CAZyme
Location: 11180 - 12106 (-)
Gene ID: HRGMv2_1581_26_13
Type: TC
Location: 12238 - 13065 (-)
Gene ID: HRGMv2_1581_26_14
Type: TC
Location: 13066 - 15081 (-)
Gene ID: HRGMv2_1581_26_15
Type: TC
Location: 15085 - 16041 (-)
Gene ID: HRGMv2_1581_26_16
Type: TC
Location: 16199 - 17812 (-)
Gene ID: HRGMv2_1581_26_17
Type: pfam
Location: 18178 - 20118 (-)
Gene ID: HRGMv2_1581_26_18
Type: TC
Location: 20125 - 21807 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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