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Cluster: HRGMv2_1581_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1581_18 HRGMv2_1581_18_30 32750 34126 - GH13_20
TC HRGMv2_1581_18 HRGMv2_1581_18_31 34281 35477 - 2.A.1.2.18
TC HRGMv2_1581_18 HRGMv2_1581_18_32 35601 37961 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1581_18 HRGMv2_1581_18_33 38083 38403 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1581_18 HRGMv2_1581_18_34 38451 39350 - S09.UPW
TC HRGMv2_1581_18 HRGMv2_1581_18_35 39595 40158 + 4.A.1.2.6
pfam HRGMv2_1581_18 HRGMv2_1581_18_36 40340 41743 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1581_18 HRGMv2_1581_18_37 41993 42778 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1581_18 HRGMv2_1581_18_38 42938 43918 + 3.A.1.34.1
TC HRGMv2_1581_18 HRGMv2_1581_18_39 44123 45046 + 3.A.1.34.1
TC HRGMv2_1581_18 HRGMv2_1581_18_40 45039 45833 + 3.A.1.34.1
Gene ID: HRGMv2_1581_18_30
Type: CAZyme
Location: 32750 - 34126 (-)
Gene ID: HRGMv2_1581_18_31
Type: TC
Location: 34281 - 35477 (-)
Gene ID: HRGMv2_1581_18_32
Type: TC
Location: 35601 - 37961 (-)
Gene ID: HRGMv2_1581_18_33
Type:
Location: 38083 - 38403 (-)
Gene ID: HRGMv2_1581_18_34
Type: peptidase
Location: 38451 - 39350 (-)
Gene ID: HRGMv2_1581_18_35
Type: TC
Location: 39595 - 40158 (+)
Gene ID: HRGMv2_1581_18_36
Type: pfam
Location: 40340 - 41743 (+)
Gene ID: HRGMv2_1581_18_37
Type:
Location: 41993 - 42778 (+)
Gene ID: HRGMv2_1581_18_38
Type: TC
Location: 42938 - 43918 (+)
Gene ID: HRGMv2_1581_18_39
Type: TC
Location: 44123 - 45046 (+)
Gene ID: HRGMv2_1581_18_40
Type: TC
Location: 45039 - 45833 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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