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Cluster: HRGMv2_1580_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1580_5 HRGMv2_1580_5_79 83565 85904 - 3.A.3.5.15
TC HRGMv2_1580_5 HRGMv2_1580_5_80 86455 88725 + 1.I.1.1.3
STP HRGMv2_1580_5 HRGMv2_1580_5_81 89353 90114 + Fer4
TC HRGMv2_1580_5 HRGMv2_1580_5_82 90395 90907 + 4.A.1.2.5
pfam HRGMv2_1580_5 HRGMv2_1580_5_83 90926 91780 + PRD | PRD | CAT_RBD
TC HRGMv2_1580_5 HRGMv2_1580_5_84 91880 93496 + 4.A.1.1.3
CAZyme HRGMv2_1580_5 HRGMv2_1580_5_85 93500 94882 + GH4
Gene ID: HRGMv2_1580_5_79
Type: TC
Location: 83565 - 85904 (-)
Gene ID: HRGMv2_1580_5_80
Type: TC
Location: 86455 - 88725 (+)
Gene ID: HRGMv2_1580_5_81
Type: STP
Location: 89353 - 90114 (+)
Gene ID: HRGMv2_1580_5_82
Type: TC
Location: 90395 - 90907 (+)
Gene ID: HRGMv2_1580_5_83
Type: pfam
Location: 90926 - 91780 (+)
Gene ID: HRGMv2_1580_5_84
Type: TC
Location: 91880 - 93496 (+)
Gene ID: HRGMv2_1580_5_85
Type: CAZyme
Location: 93500 - 94882 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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