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Cluster: HRGMv2_1580_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1580_30 HRGMv2_1580_30_4 3938 5443 + GH77
CAZyme HRGMv2_1580_30 HRGMv2_1580_30_5 5571 7838 + GT35
TC HRGMv2_1580_30 HRGMv2_1580_30_6 8294 9493 - 3.A.1.1.22
TC HRGMv2_1580_30 HRGMv2_1580_30_7 9562 10401 - 3.A.1.1.45
TC HRGMv2_1580_30 HRGMv2_1580_30_8 10401 11255 - 3.A.1.1.45
TC HRGMv2_1580_30 HRGMv2_1580_30_9 11343 12659 - 3.A.1.1.45
TF HRGMv2_1580_30 HRGMv2_1580_30_10 12966 13685 - GntR
NULL(UNKNOWN) HRGMv2_1580_30 HRGMv2_1580_30_11 13769 13888 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1580_30 HRGMv2_1580_30_12 13910 16360 + 4.A.1.1.8
Gene ID: HRGMv2_1580_30_4
Type: CAZyme
Location: 3938 - 5443 (+)
Gene ID: HRGMv2_1580_30_5
Type: CAZyme
Location: 5571 - 7838 (+)
Gene ID: HRGMv2_1580_30_6
Type: TC
Location: 8294 - 9493 (-)
Gene ID: HRGMv2_1580_30_7
Type: TC
Location: 9562 - 10401 (-)
Gene ID: HRGMv2_1580_30_8
Type: TC
Location: 10401 - 11255 (-)
Gene ID: HRGMv2_1580_30_9
Type: TC
Location: 11343 - 12659 (-)
Gene ID: HRGMv2_1580_30_10
Type: TF
Location: 12966 - 13685 (-)
Gene ID: HRGMv2_1580_30_11
Type:
Location: 13769 - 13888 (-)
Gene ID: HRGMv2_1580_30_12
Type: TC
Location: 13910 - 16360 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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