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Cluster: HRGMv2_1580_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1580_20 HRGMv2_1580_20_17 16634 17518 - CE7
TC HRGMv2_1580_20 HRGMv2_1580_20_18 17692 18519 - 3.A.1.5.27
TC HRGMv2_1580_20 HRGMv2_1580_20_19 18520 20535 - 3.A.1.5.25
TC HRGMv2_1580_20 HRGMv2_1580_20_20 20539 21495 - 3.A.1.5.38
TC HRGMv2_1580_20 HRGMv2_1580_20_21 21653 23269 - 3.A.1.5.27
pfam HRGMv2_1580_20 HRGMv2_1580_20_22 23634 25574 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1580_20 HRGMv2_1580_20_23 25581 27263 - 2.A.66.4.4
Gene ID: HRGMv2_1580_20_17
Type: CAZyme
Location: 16634 - 17518 (-)
Gene ID: HRGMv2_1580_20_18
Type: TC
Location: 17692 - 18519 (-)
Gene ID: HRGMv2_1580_20_19
Type: TC
Location: 18520 - 20535 (-)
Gene ID: HRGMv2_1580_20_20
Type: TC
Location: 20539 - 21495 (-)
Gene ID: HRGMv2_1580_20_21
Type: TC
Location: 21653 - 23269 (-)
Gene ID: HRGMv2_1580_20_22
Type: pfam
Location: 23634 - 25574 (-)
Gene ID: HRGMv2_1580_20_23
Type: TC
Location: 25581 - 27263 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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