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Cluster: HRGMv2_1579_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1579_8 HRGMv2_1579_8_4 1559 2935 - GH13_20
TC HRGMv2_1579_8 HRGMv2_1579_8_5 3090 4286 - 2.A.1.2.18
TC HRGMv2_1579_8 HRGMv2_1579_8_6 4407 6767 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1579_8 HRGMv2_1579_8_7 6889 7209 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1579_8 HRGMv2_1579_8_8 7257 8156 - S09.UPW
TC HRGMv2_1579_8 HRGMv2_1579_8_9 8401 8964 + 4.A.1.2.6
pfam HRGMv2_1579_8 HRGMv2_1579_8_10 9146 10549 + tRNA-synt_2 | tRNA_anti-codon
pfam HRGMv2_1579_8 HRGMv2_1579_8_11 10805 11593 + WYL
TC HRGMv2_1579_8 HRGMv2_1579_8_12 11753 12733 + 3.A.1.34.1
TC HRGMv2_1579_8 HRGMv2_1579_8_13 12938 13861 + 3.A.1.34.1
TC HRGMv2_1579_8 HRGMv2_1579_8_14 13854 14648 + 3.A.1.34.1
Gene ID: HRGMv2_1579_8_4
Type: CAZyme
Location: 1559 - 2935 (-)
Gene ID: HRGMv2_1579_8_5
Type: TC
Location: 3090 - 4286 (-)
Gene ID: HRGMv2_1579_8_6
Type: TC
Location: 4407 - 6767 (-)
Gene ID: HRGMv2_1579_8_7
Type:
Location: 6889 - 7209 (-)
Gene ID: HRGMv2_1579_8_8
Type: peptidase
Location: 7257 - 8156 (-)
Gene ID: HRGMv2_1579_8_9
Type: TC
Location: 8401 - 8964 (+)
Gene ID: HRGMv2_1579_8_10
Type: pfam
Location: 9146 - 10549 (+)
Gene ID: HRGMv2_1579_8_11
Type: pfam
Location: 10805 - 11593 (+)
Gene ID: HRGMv2_1579_8_12
Type: TC
Location: 11753 - 12733 (+)
Gene ID: HRGMv2_1579_8_13
Type: TC
Location: 12938 - 13861 (+)
Gene ID: HRGMv2_1579_8_14
Type: TC
Location: 13854 - 14648 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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