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Cluster: HRGMv2_1579_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1579_39 HRGMv2_1579_39_3 3032 3514 + 4.A.6.1.5
sulfatase HRGMv2_1579_39 HRGMv2_1579_39_4 3841 4893 - S1_4
TF HRGMv2_1579_39 HRGMv2_1579_39_5 5100 5864 + HTH_DeoR
CAZyme HRGMv2_1579_39 HRGMv2_1579_39_6 6061 7482 - GH1
TC HRGMv2_1579_39 HRGMv2_1579_39_7 7558 9336 - 4.A.3.1.1
TF HRGMv2_1579_39 HRGMv2_1579_39_8 9621 10622 + LacI
CAZyme HRGMv2_1579_39 HRGMv2_1579_39_9 10897 12336 - GH1
TC HRGMv2_1579_39 HRGMv2_1579_39_10 12403 14172 - 4.A.3.1.1
TF HRGMv2_1579_39 HRGMv2_1579_39_11 14529 15533 + LacI
TC HRGMv2_1579_39 HRGMv2_1579_39_12 15748 16086 + 4.A.3.1.2
Gene ID: HRGMv2_1579_39_3
Type: TC
Location: 3032 - 3514 (+)
Gene ID: HRGMv2_1579_39_4
Type: sulfatase
Location: 3841 - 4893 (-)
Gene ID: HRGMv2_1579_39_5
Type: TF
Location: 5100 - 5864 (+)
Gene ID: HRGMv2_1579_39_6
Type: CAZyme
Location: 6061 - 7482 (-)
Gene ID: HRGMv2_1579_39_7
Type: TC
Location: 7558 - 9336 (-)
Gene ID: HRGMv2_1579_39_8
Type: TF
Location: 9621 - 10622 (+)
Gene ID: HRGMv2_1579_39_9
Type: CAZyme
Location: 10897 - 12336 (-)
Gene ID: HRGMv2_1579_39_10
Type: TC
Location: 12403 - 14172 (-)
Gene ID: HRGMv2_1579_39_11
Type: TF
Location: 14529 - 15533 (+)
Gene ID: HRGMv2_1579_39_12
Type: TC
Location: 15748 - 16086 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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