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Cluster: HRGMv2_1579_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1579_18 HRGMv2_1579_18_10 13495 15798 + 2.A.66.4.4
pfam HRGMv2_1579_18 HRGMv2_1579_18_11 15805 17745 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1579_18 HRGMv2_1579_18_12 18111 19724 + 3.A.1.5.27
TC HRGMv2_1579_18 HRGMv2_1579_18_13 19882 20838 + 3.A.1.5.38
TC HRGMv2_1579_18 HRGMv2_1579_18_14 20842 22857 + 3.A.1.5.25
TC HRGMv2_1579_18 HRGMv2_1579_18_15 22858 23685 + 3.A.1.5.27
CAZyme HRGMv2_1579_18 HRGMv2_1579_18_16 23817 24743 + CE7
Gene ID: HRGMv2_1579_18_10
Type: TC
Location: 13495 - 15798 (+)
Gene ID: HRGMv2_1579_18_11
Type: pfam
Location: 15805 - 17745 (+)
Gene ID: HRGMv2_1579_18_12
Type: TC
Location: 18111 - 19724 (+)
Gene ID: HRGMv2_1579_18_13
Type: TC
Location: 19882 - 20838 (+)
Gene ID: HRGMv2_1579_18_14
Type: TC
Location: 20842 - 22857 (+)
Gene ID: HRGMv2_1579_18_15
Type: TC
Location: 22858 - 23685 (+)
Gene ID: HRGMv2_1579_18_16
Type: CAZyme
Location: 23817 - 24743 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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