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Cluster: HRGMv2_1578_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1578_10 HRGMv2_1578_10_28 35499 37175 + 3.A.1.5.35
TC HRGMv2_1578_10 HRGMv2_1578_10_29 37332 38369 + 3.A.1.5.37
TC HRGMv2_1578_10 HRGMv2_1578_10_30 38384 39319 + 3.A.1.5.11
TC HRGMv2_1578_10 HRGMv2_1578_10_31 39322 40413 + 3.A.1.5.34
TC HRGMv2_1578_10 HRGMv2_1578_10_32 40413 40742 + 3.A.1.5.36
TC HRGMv2_1578_10 HRGMv2_1578_10_33 40791 41441 + 3.A.1.5.20
STP HRGMv2_1578_10 HRGMv2_1578_10_34 42191 44536 + GAF | SpoIIE
STP HRGMv2_1578_10 HRGMv2_1578_10_35 44615 45361 + STAS
CAZyme HRGMv2_1578_10 HRGMv2_1578_10_36 46131 47864 + GH13_30
Gene ID: HRGMv2_1578_10_28
Type: TC
Location: 35499 - 37175 (+)
Gene ID: HRGMv2_1578_10_29
Type: TC
Location: 37332 - 38369 (+)
Gene ID: HRGMv2_1578_10_30
Type: TC
Location: 38384 - 39319 (+)
Gene ID: HRGMv2_1578_10_31
Type: TC
Location: 39322 - 40413 (+)
Gene ID: HRGMv2_1578_10_32
Type: TC
Location: 40413 - 40742 (+)
Gene ID: HRGMv2_1578_10_33
Type: TC
Location: 40791 - 41441 (+)
Gene ID: HRGMv2_1578_10_34
Type: STP
Location: 42191 - 44536 (+)
Gene ID: HRGMv2_1578_10_35
Type: STP
Location: 44615 - 45361 (+)
Gene ID: HRGMv2_1578_10_36
Type: CAZyme
Location: 46131 - 47864 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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