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Cluster: HRGMv2_1578_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1578_10 HRGMv2_1578_10_10 13605 15287 + 2.A.66.4.4
pfam HRGMv2_1578_10 HRGMv2_1578_10_11 15294 17234 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1578_10 HRGMv2_1578_10_12 17600 19213 + 3.A.1.5.27
TC HRGMv2_1578_10 HRGMv2_1578_10_13 19371 20327 + 3.A.1.5.38
TC HRGMv2_1578_10 HRGMv2_1578_10_14 20331 22346 + 3.A.1.5.25
TC HRGMv2_1578_10 HRGMv2_1578_10_15 22347 23174 + 3.A.1.5.27
CAZyme HRGMv2_1578_10 HRGMv2_1578_10_16 23306 24232 + CE7
Gene ID: HRGMv2_1578_10_10
Type: TC
Location: 13605 - 15287 (+)
Gene ID: HRGMv2_1578_10_11
Type: pfam
Location: 15294 - 17234 (+)
Gene ID: HRGMv2_1578_10_12
Type: TC
Location: 17600 - 19213 (+)
Gene ID: HRGMv2_1578_10_13
Type: TC
Location: 19371 - 20327 (+)
Gene ID: HRGMv2_1578_10_14
Type: TC
Location: 20331 - 22346 (+)
Gene ID: HRGMv2_1578_10_15
Type: TC
Location: 22347 - 23174 (+)
Gene ID: HRGMv2_1578_10_16
Type: CAZyme
Location: 23306 - 24232 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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