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Cluster: HRGMv2_1578_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1578_9 HRGMv2_1578_9_67 69115 70491 - GH13_20
TC HRGMv2_1578_9 HRGMv2_1578_9_68 70646 71842 - 2.A.1.2.18
TC HRGMv2_1578_9 HRGMv2_1578_9_69 71968 74328 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1578_9 HRGMv2_1578_9_70 74450 74770 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1578_9 HRGMv2_1578_9_71 74818 75717 - S09.UPW
TC HRGMv2_1578_9 HRGMv2_1578_9_72 75963 76526 + 4.A.1.2.6
pfam HRGMv2_1578_9 HRGMv2_1578_9_73 76708 78111 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1578_9 HRGMv2_1578_9_74 78361 79146 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1578_9 HRGMv2_1578_9_75 79307 80287 + 3.A.1.34.1
TC HRGMv2_1578_9 HRGMv2_1578_9_76 80477 81400 + 3.A.1.34.1
TC HRGMv2_1578_9 HRGMv2_1578_9_77 81393 82187 + 3.A.1.34.1
Gene ID: HRGMv2_1578_9_67
Type: CAZyme
Location: 69115 - 70491 (-)
Gene ID: HRGMv2_1578_9_68
Type: TC
Location: 70646 - 71842 (-)
Gene ID: HRGMv2_1578_9_69
Type: TC
Location: 71968 - 74328 (-)
Gene ID: HRGMv2_1578_9_70
Type:
Location: 74450 - 74770 (-)
Gene ID: HRGMv2_1578_9_71
Type: peptidase
Location: 74818 - 75717 (-)
Gene ID: HRGMv2_1578_9_72
Type: TC
Location: 75963 - 76526 (+)
Gene ID: HRGMv2_1578_9_73
Type: pfam
Location: 76708 - 78111 (+)
Gene ID: HRGMv2_1578_9_74
Type:
Location: 78361 - 79146 (+)
Gene ID: HRGMv2_1578_9_75
Type: TC
Location: 79307 - 80287 (+)
Gene ID: HRGMv2_1578_9_76
Type: TC
Location: 80477 - 81400 (+)
Gene ID: HRGMv2_1578_9_77
Type: TC
Location: 81393 - 82187 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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