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Cluster: HRGMv2_1577_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1577_5 HRGMv2_1577_5_120 122776 123702 - CE7
TC HRGMv2_1577_5 HRGMv2_1577_5_121 123834 124661 - 3.A.1.5.27
TC HRGMv2_1577_5 HRGMv2_1577_5_122 124662 126677 - 3.A.1.5.25
TC HRGMv2_1577_5 HRGMv2_1577_5_123 126681 127637 - 3.A.1.5.38
TC HRGMv2_1577_5 HRGMv2_1577_5_124 127795 129408 - 3.A.1.5.27
pfam HRGMv2_1577_5 HRGMv2_1577_5_125 129774 131714 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1577_5 HRGMv2_1577_5_126 131721 133403 - 2.A.66.4.4
Gene ID: HRGMv2_1577_5_120
Type: CAZyme
Location: 122776 - 123702 (-)
Gene ID: HRGMv2_1577_5_121
Type: TC
Location: 123834 - 124661 (-)
Gene ID: HRGMv2_1577_5_122
Type: TC
Location: 124662 - 126677 (-)
Gene ID: HRGMv2_1577_5_123
Type: TC
Location: 126681 - 127637 (-)
Gene ID: HRGMv2_1577_5_124
Type: TC
Location: 127795 - 129408 (-)
Gene ID: HRGMv2_1577_5_125
Type: pfam
Location: 129774 - 131714 (-)
Gene ID: HRGMv2_1577_5_126
Type: TC
Location: 131721 - 133403 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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