dbCAN Logo

Cluster: HRGMv2_1577_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1577_3 HRGMv2_1577_3_111 128719 129888 - CE9
STP HRGMv2_1577_3 HRGMv2_1577_3_112 130006 131172 - SIS | SIS
TF HRGMv2_1577_3 HRGMv2_1577_3_113 131287 132018 - GntR
TC HRGMv2_1577_3 HRGMv2_1577_3_114 132203 133285 - 4.A.6.1.4
TC HRGMv2_1577_3 HRGMv2_1577_3_115 133275 134075 - 4.A.6.1.4
TC HRGMv2_1577_3 HRGMv2_1577_3_116 134166 134648 - 4.A.6.1.4
pfam HRGMv2_1577_3 HRGMv2_1577_3_117 134685 134966 - YajC
TC HRGMv2_1577_3 HRGMv2_1577_3_118 134966 135409 - 4.A.6.1.16
Gene ID: HRGMv2_1577_3_111
Type: CAZyme
Location: 128719 - 129888 (-)
Gene ID: HRGMv2_1577_3_112
Type: STP
Location: 130006 - 131172 (-)
Gene ID: HRGMv2_1577_3_113
Type: TF
Location: 131287 - 132018 (-)
Gene ID: HRGMv2_1577_3_114
Type: TC
Location: 132203 - 133285 (-)
Gene ID: HRGMv2_1577_3_115
Type: TC
Location: 133275 - 134075 (-)
Gene ID: HRGMv2_1577_3_116
Type: TC
Location: 134166 - 134648 (-)
Gene ID: HRGMv2_1577_3_117
Type: pfam
Location: 134685 - 134966 (-)
Gene ID: HRGMv2_1577_3_118
Type: TC
Location: 134966 - 135409 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List