dbCAN Logo

Cluster: HRGMv2_1577_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1577_19 HRGMv2_1577_19_11 15188 17638 - 4.A.1.1.8
TF HRGMv2_1577_19 HRGMv2_1577_19_12 17866 18585 + GntR
TC HRGMv2_1577_19 HRGMv2_1577_19_13 18892 20208 + 3.A.1.1.45
TC HRGMv2_1577_19 HRGMv2_1577_19_14 20296 21150 + 3.A.1.1.45
TC HRGMv2_1577_19 HRGMv2_1577_19_15 21150 21989 + 3.A.1.1.45
TC HRGMv2_1577_19 HRGMv2_1577_19_16 22057 23256 + 3.A.1.1.22
CAZyme HRGMv2_1577_19 HRGMv2_1577_19_17 23632 25899 - GT35
CAZyme HRGMv2_1577_19 HRGMv2_1577_19_18 26029 27534 - GH77
Gene ID: HRGMv2_1577_19_11
Type: TC
Location: 15188 - 17638 (-)
Gene ID: HRGMv2_1577_19_12
Type: TF
Location: 17866 - 18585 (+)
Gene ID: HRGMv2_1577_19_13
Type: TC
Location: 18892 - 20208 (+)
Gene ID: HRGMv2_1577_19_14
Type: TC
Location: 20296 - 21150 (+)
Gene ID: HRGMv2_1577_19_15
Type: TC
Location: 21150 - 21989 (+)
Gene ID: HRGMv2_1577_19_16
Type: TC
Location: 22057 - 23256 (+)
Gene ID: HRGMv2_1577_19_17
Type: CAZyme
Location: 23632 - 25899 (-)
Gene ID: HRGMv2_1577_19_18
Type: CAZyme
Location: 26029 - 27534 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List