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Cluster: HRGMv2_1577_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1577_7 HRGMv2_1577_7_66 74446 75822 - GH13_20
TC HRGMv2_1577_7 HRGMv2_1577_7_67 75976 77172 - 2.A.1.2.18
TC HRGMv2_1577_7 HRGMv2_1577_7_68 77297 79657 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1577_7 HRGMv2_1577_7_69 79779 80099 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1577_7 HRGMv2_1577_7_70 80147 81046 - S09.UPW
TC HRGMv2_1577_7 HRGMv2_1577_7_71 81291 81854 + 4.A.1.2.6
pfam HRGMv2_1577_7 HRGMv2_1577_7_72 82036 83439 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1577_7 HRGMv2_1577_7_73 83689 84474 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1577_7 HRGMv2_1577_7_74 84635 85615 + 3.A.1.34.1
TC HRGMv2_1577_7 HRGMv2_1577_7_75 85805 86728 + 3.A.1.34.1
TC HRGMv2_1577_7 HRGMv2_1577_7_76 86721 87515 + 3.A.1.34.1
Gene ID: HRGMv2_1577_7_66
Type: CAZyme
Location: 74446 - 75822 (-)
Gene ID: HRGMv2_1577_7_67
Type: TC
Location: 75976 - 77172 (-)
Gene ID: HRGMv2_1577_7_68
Type: TC
Location: 77297 - 79657 (-)
Gene ID: HRGMv2_1577_7_69
Type:
Location: 79779 - 80099 (-)
Gene ID: HRGMv2_1577_7_70
Type: peptidase
Location: 80147 - 81046 (-)
Gene ID: HRGMv2_1577_7_71
Type: TC
Location: 81291 - 81854 (+)
Gene ID: HRGMv2_1577_7_72
Type: pfam
Location: 82036 - 83439 (+)
Gene ID: HRGMv2_1577_7_73
Type:
Location: 83689 - 84474 (+)
Gene ID: HRGMv2_1577_7_74
Type: TC
Location: 84635 - 85615 (+)
Gene ID: HRGMv2_1577_7_75
Type: TC
Location: 85805 - 86728 (+)
Gene ID: HRGMv2_1577_7_76
Type: TC
Location: 86721 - 87515 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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