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Cluster: HRGMv2_1575_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1575_7 HRGMv2_1575_7_31 26991 28685 + 4.A.3.1.1
pfam HRGMv2_1575_7 HRGMv2_1575_7_32 29045 29350 - ParE_toxin
NULL(UNKNOWN) HRGMv2_1575_7 HRGMv2_1575_7_33 29340 29606 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1575_7 HRGMv2_1575_7_34 29904 31325 - GH1
TC HRGMv2_1575_7 HRGMv2_1575_7_35 31400 33178 - 4.A.3.1.1
TF HRGMv2_1575_7 HRGMv2_1575_7_36 33454 34464 + LacI
CAZyme HRGMv2_1575_7 HRGMv2_1575_7_37 34905 36344 - GH1
TC HRGMv2_1575_7 HRGMv2_1575_7_38 36411 38186 - 4.A.3.1.1
TF HRGMv2_1575_7 HRGMv2_1575_7_39 38543 39547 + LacI
TC HRGMv2_1575_7 HRGMv2_1575_7_40 39762 40100 + 4.A.3.1.2
Gene ID: HRGMv2_1575_7_31
Type: TC
Location: 26991 - 28685 (+)
Gene ID: HRGMv2_1575_7_32
Type: pfam
Location: 29045 - 29350 (-)
Gene ID: HRGMv2_1575_7_33
Type:
Location: 29340 - 29606 (-)
Gene ID: HRGMv2_1575_7_34
Type: CAZyme
Location: 29904 - 31325 (-)
Gene ID: HRGMv2_1575_7_35
Type: TC
Location: 31400 - 33178 (-)
Gene ID: HRGMv2_1575_7_36
Type: TF
Location: 33454 - 34464 (+)
Gene ID: HRGMv2_1575_7_37
Type: CAZyme
Location: 34905 - 36344 (-)
Gene ID: HRGMv2_1575_7_38
Type: TC
Location: 36411 - 38186 (-)
Gene ID: HRGMv2_1575_7_39
Type: TF
Location: 38543 - 39547 (+)
Gene ID: HRGMv2_1575_7_40
Type: TC
Location: 39762 - 40100 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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