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Cluster: HRGMv2_1575_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1575_26 HRGMv2_1575_26_13 12505 14010 + GH77
CAZyme HRGMv2_1575_26 HRGMv2_1575_26_14 14138 16405 + GT35
TC HRGMv2_1575_26 HRGMv2_1575_26_15 16939 18138 - 3.A.1.1.22
TC HRGMv2_1575_26 HRGMv2_1575_26_16 18207 19046 - 3.A.1.1.45
TC HRGMv2_1575_26 HRGMv2_1575_26_17 19046 19900 - 3.A.1.1.45
TC HRGMv2_1575_26 HRGMv2_1575_26_18 19988 21304 - 3.A.1.1.45
TF HRGMv2_1575_26 HRGMv2_1575_26_19 21611 22330 - GntR
TC HRGMv2_1575_26 HRGMv2_1575_26_20 22558 25008 + 4.A.1.1.8
Gene ID: HRGMv2_1575_26_13
Type: CAZyme
Location: 12505 - 14010 (+)
Gene ID: HRGMv2_1575_26_14
Type: CAZyme
Location: 14138 - 16405 (+)
Gene ID: HRGMv2_1575_26_15
Type: TC
Location: 16939 - 18138 (-)
Gene ID: HRGMv2_1575_26_16
Type: TC
Location: 18207 - 19046 (-)
Gene ID: HRGMv2_1575_26_17
Type: TC
Location: 19046 - 19900 (-)
Gene ID: HRGMv2_1575_26_18
Type: TC
Location: 19988 - 21304 (-)
Gene ID: HRGMv2_1575_26_19
Type: TF
Location: 21611 - 22330 (-)
Gene ID: HRGMv2_1575_26_20
Type: TC
Location: 22558 - 25008 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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