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Cluster: HRGMv2_1575_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1575_23 HRGMv2_1575_23_17 19166 20548 - GH4
TC HRGMv2_1575_23 HRGMv2_1575_23_18 20552 22168 - 4.A.1.1.3
pfam HRGMv2_1575_23 HRGMv2_1575_23_19 22268 23134 - PRD | PRD | CAT_RBD
TC HRGMv2_1575_23 HRGMv2_1575_23_20 23141 23653 - 4.A.1.2.5
STP HRGMv2_1575_23 HRGMv2_1575_23_21 23934 24695 - Fer4
TC HRGMv2_1575_23 HRGMv2_1575_23_22 25323 27593 - 1.I.1.1.3
TC HRGMv2_1575_23 HRGMv2_1575_23_23 28154 30493 + 3.A.3.5.15
Gene ID: HRGMv2_1575_23_17
Type: CAZyme
Location: 19166 - 20548 (-)
Gene ID: HRGMv2_1575_23_18
Type: TC
Location: 20552 - 22168 (-)
Gene ID: HRGMv2_1575_23_19
Type: pfam
Location: 22268 - 23134 (-)
Gene ID: HRGMv2_1575_23_20
Type: TC
Location: 23141 - 23653 (-)
Gene ID: HRGMv2_1575_23_21
Type: STP
Location: 23934 - 24695 (-)
Gene ID: HRGMv2_1575_23_22
Type: TC
Location: 25323 - 27593 (-)
Gene ID: HRGMv2_1575_23_23
Type: TC
Location: 28154 - 30493 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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