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Cluster: HRGMv2_1575_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1575_17 HRGMv2_1575_17_19 21575 22459 - CE7
TC HRGMv2_1575_17 HRGMv2_1575_17_20 22633 23460 - 3.A.1.5.27
TC HRGMv2_1575_17 HRGMv2_1575_17_21 23461 25476 - 3.A.1.5.25
TC HRGMv2_1575_17 HRGMv2_1575_17_22 25480 26436 - 3.A.1.5.38
TC HRGMv2_1575_17 HRGMv2_1575_17_23 26594 28207 - 3.A.1.5.27
pfam HRGMv2_1575_17 HRGMv2_1575_17_24 28573 30513 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1575_17 HRGMv2_1575_17_25 30520 32202 - 2.A.66.4.4
Gene ID: HRGMv2_1575_17_19
Type: CAZyme
Location: 21575 - 22459 (-)
Gene ID: HRGMv2_1575_17_20
Type: TC
Location: 22633 - 23460 (-)
Gene ID: HRGMv2_1575_17_21
Type: TC
Location: 23461 - 25476 (-)
Gene ID: HRGMv2_1575_17_22
Type: TC
Location: 25480 - 26436 (-)
Gene ID: HRGMv2_1575_17_23
Type: TC
Location: 26594 - 28207 (-)
Gene ID: HRGMv2_1575_17_24
Type: pfam
Location: 28573 - 30513 (-)
Gene ID: HRGMv2_1575_17_25
Type: TC
Location: 30520 - 32202 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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