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Cluster: HRGMv2_1574_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1574_39 HRGMv2_1574_39_3 2886 4391 + GH77
CAZyme HRGMv2_1574_39 HRGMv2_1574_39_4 4520 6787 + GT35
TC HRGMv2_1574_39 HRGMv2_1574_39_5 7244 8443 - 3.A.1.1.22
TC HRGMv2_1574_39 HRGMv2_1574_39_6 8512 9351 - 3.A.1.1.45
TC HRGMv2_1574_39 HRGMv2_1574_39_7 9351 10205 - 3.A.1.1.45
TC HRGMv2_1574_39 HRGMv2_1574_39_8 10294 11610 - 3.A.1.1.45
TF HRGMv2_1574_39 HRGMv2_1574_39_9 11917 12636 - GntR
NULL(UNKNOWN) HRGMv2_1574_39 HRGMv2_1574_39_10 12720 12839 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1574_39 HRGMv2_1574_39_11 12861 15311 + 4.A.1.1.8
Gene ID: HRGMv2_1574_39_3
Type: CAZyme
Location: 2886 - 4391 (+)
Gene ID: HRGMv2_1574_39_4
Type: CAZyme
Location: 4520 - 6787 (+)
Gene ID: HRGMv2_1574_39_5
Type: TC
Location: 7244 - 8443 (-)
Gene ID: HRGMv2_1574_39_6
Type: TC
Location: 8512 - 9351 (-)
Gene ID: HRGMv2_1574_39_7
Type: TC
Location: 9351 - 10205 (-)
Gene ID: HRGMv2_1574_39_8
Type: TC
Location: 10294 - 11610 (-)
Gene ID: HRGMv2_1574_39_9
Type: TF
Location: 11917 - 12636 (-)
Gene ID: HRGMv2_1574_39_10
Type:
Location: 12720 - 12839 (-)
Gene ID: HRGMv2_1574_39_11
Type: TC
Location: 12861 - 15311 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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