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Cluster: HRGMv2_1574_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1574_31 HRGMv2_1574_31_3 1343 2725 - GH4
TC HRGMv2_1574_31 HRGMv2_1574_31_4 2729 4345 - 4.A.1.1.3
pfam HRGMv2_1574_31 HRGMv2_1574_31_5 4445 5299 - PRD | PRD | CAT_RBD
TC HRGMv2_1574_31 HRGMv2_1574_31_6 5318 5830 - 4.A.1.2.5
STP HRGMv2_1574_31 HRGMv2_1574_31_7 6174 6935 - Fer4
TC HRGMv2_1574_31 HRGMv2_1574_31_8 7554 9803 - 1.I.1.1.3
STP HRGMv2_1574_31 HRGMv2_1574_31_9 10384 11346 + FHA
STP HRGMv2_1574_31 HRGMv2_1574_31_10 11518 13467 + Pkinase
TC HRGMv2_1574_31 HRGMv2_1574_31_11 14174 16516 + 3.A.3.5.15
Gene ID: HRGMv2_1574_31_3
Type: CAZyme
Location: 1343 - 2725 (-)
Gene ID: HRGMv2_1574_31_4
Type: TC
Location: 2729 - 4345 (-)
Gene ID: HRGMv2_1574_31_5
Type: pfam
Location: 4445 - 5299 (-)
Gene ID: HRGMv2_1574_31_6
Type: TC
Location: 5318 - 5830 (-)
Gene ID: HRGMv2_1574_31_7
Type: STP
Location: 6174 - 6935 (-)
Gene ID: HRGMv2_1574_31_8
Type: TC
Location: 7554 - 9803 (-)
Gene ID: HRGMv2_1574_31_9
Type: STP
Location: 10384 - 11346 (+)
Gene ID: HRGMv2_1574_31_10
Type: STP
Location: 11518 - 13467 (+)
Gene ID: HRGMv2_1574_31_11
Type: TC
Location: 14174 - 16516 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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