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Cluster: HRGMv2_1574_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1574_16 HRGMv2_1574_16_10 13606 15288 + 2.A.66.4.4
pfam HRGMv2_1574_16 HRGMv2_1574_16_11 15295 17235 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1574_16 HRGMv2_1574_16_12 17601 19214 + 3.A.1.5.27
TC HRGMv2_1574_16 HRGMv2_1574_16_13 19372 20328 + 3.A.1.5.38
TC HRGMv2_1574_16 HRGMv2_1574_16_14 20332 22347 + 3.A.1.5.25
TC HRGMv2_1574_16 HRGMv2_1574_16_15 22348 23175 + 3.A.1.5.27
CAZyme HRGMv2_1574_16 HRGMv2_1574_16_16 23349 24233 + CE7
Gene ID: HRGMv2_1574_16_10
Type: TC
Location: 13606 - 15288 (+)
Gene ID: HRGMv2_1574_16_11
Type: pfam
Location: 15295 - 17235 (+)
Gene ID: HRGMv2_1574_16_12
Type: TC
Location: 17601 - 19214 (+)
Gene ID: HRGMv2_1574_16_13
Type: TC
Location: 19372 - 20328 (+)
Gene ID: HRGMv2_1574_16_14
Type: TC
Location: 20332 - 22347 (+)
Gene ID: HRGMv2_1574_16_15
Type: TC
Location: 22348 - 23175 (+)
Gene ID: HRGMv2_1574_16_16
Type: CAZyme
Location: 23349 - 24233 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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