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Cluster: HRGMv2_1572_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1572_39 HRGMv2_1572_39_2 418 1830 - GH1
TF HRGMv2_1572_39 HRGMv2_1572_39_3 1846 3744 - HTH_11
pfam HRGMv2_1572_39 HRGMv2_1572_39_4 3975 4730 + YdjC
CAZyme HRGMv2_1572_39 HRGMv2_1572_39_5 4823 6067 + GH1
CAZyme HRGMv2_1572_39 HRGMv2_1572_39_6 6137 7564 + GH140
TF HRGMv2_1572_39 HRGMv2_1572_39_7 8181 9038 + HTH_6
CAZyme HRGMv2_1572_39 HRGMv2_1572_39_8 9111 10439 - GH4
NULL(UNKNOWN) HRGMv2_1572_39 HRGMv2_1572_39_9 10459 10728 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1572_39 HRGMv2_1572_39_10 10767 12329 - 4.A.1.1.7
Gene ID: HRGMv2_1572_39_2
Type: CAZyme
Location: 418 - 1830 (-)
Gene ID: HRGMv2_1572_39_3
Type: TF
Location: 1846 - 3744 (-)
Gene ID: HRGMv2_1572_39_4
Type: pfam
Location: 3975 - 4730 (+)
Gene ID: HRGMv2_1572_39_5
Type: CAZyme
Location: 4823 - 6067 (+)
Gene ID: HRGMv2_1572_39_6
Type: CAZyme
Location: 6137 - 7564 (+)
Gene ID: HRGMv2_1572_39_7
Type: TF
Location: 8181 - 9038 (+)
Gene ID: HRGMv2_1572_39_8
Type: CAZyme
Location: 9111 - 10439 (-)
Gene ID: HRGMv2_1572_39_9
Type:
Location: 10459 - 10728 (-)
Gene ID: HRGMv2_1572_39_10
Type: TC
Location: 10767 - 12329 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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