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Cluster: HRGMv2_1571_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1571_4 HRGMv2_1571_4_49 50406 51764 - 2.A.33.1.1
pfam HRGMv2_1571_4 HRGMv2_1571_4_50 52031 52954 - DHH | DHHA2
STP HRGMv2_1571_4 HRGMv2_1571_4_51 53123 54076 - Glucokinase
TC HRGMv2_1571_4 HRGMv2_1571_4_52 54318 54650 - 4.A.3.2.3
TC HRGMv2_1571_4 HRGMv2_1571_4_53 54660 54962 - 4.A.3.2.9
TC HRGMv2_1571_4 HRGMv2_1571_4_54 55120 56472 - 4.A.3.2.9
CAZyme HRGMv2_1571_4 HRGMv2_1571_4_55 56593 57993 - GH1
Gene ID: HRGMv2_1571_4_49
Type: TC
Location: 50406 - 51764 (-)
Gene ID: HRGMv2_1571_4_50
Type: pfam
Location: 52031 - 52954 (-)
Gene ID: HRGMv2_1571_4_51
Type: STP
Location: 53123 - 54076 (-)
Gene ID: HRGMv2_1571_4_52
Type: TC
Location: 54318 - 54650 (-)
Gene ID: HRGMv2_1571_4_53
Type: TC
Location: 54660 - 54962 (-)
Gene ID: HRGMv2_1571_4_54
Type: TC
Location: 55120 - 56472 (-)
Gene ID: HRGMv2_1571_4_55
Type: CAZyme
Location: 56593 - 57993 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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