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Cluster: HRGMv2_1571_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1571_14 HRGMv2_1571_14_36 44434 45900 - 2.A.66.2.23
pfam HRGMv2_1571_14 HRGMv2_1571_14_37 45985 46932 - ATPgrasp_TupA
pfam HRGMv2_1571_14 HRGMv2_1571_14_38 47076 48164 - EpsG
CAZyme HRGMv2_1571_14 HRGMv2_1571_14_39 48161 49264 - GT4
pfam HRGMv2_1571_14 HRGMv2_1571_14_40 49261 50208 - C5-epim_C
CAZyme HRGMv2_1571_14 HRGMv2_1571_14_41 50208 51500 - GT4
pfam HRGMv2_1571_14 HRGMv2_1571_14_42 51506 52777 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_1571_14 HRGMv2_1571_14_43 52821 53738 - GT2
TC HRGMv2_1571_14 HRGMv2_1571_14_44 53742 54506 - 9.B.18.1.2
Gene ID: HRGMv2_1571_14_36
Type: TC
Location: 44434 - 45900 (-)
Gene ID: HRGMv2_1571_14_37
Type: pfam
Location: 45985 - 46932 (-)
Gene ID: HRGMv2_1571_14_38
Type: pfam
Location: 47076 - 48164 (-)
Gene ID: HRGMv2_1571_14_39
Type: CAZyme
Location: 48161 - 49264 (-)
Gene ID: HRGMv2_1571_14_40
Type: pfam
Location: 49261 - 50208 (-)
Gene ID: HRGMv2_1571_14_41
Type: CAZyme
Location: 50208 - 51500 (-)
Gene ID: HRGMv2_1571_14_42
Type: pfam
Location: 51506 - 52777 (-)
Gene ID: HRGMv2_1571_14_43
Type: CAZyme
Location: 52821 - 53738 (-)
Gene ID: HRGMv2_1571_14_44
Type: TC
Location: 53742 - 54506 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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