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Cluster: HRGMv2_1571_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1571_12 HRGMv2_1571_12_1 2 1162 - 2.A.66.2.2
NULL(UNKNOWN) HRGMv2_1571_12 HRGMv2_1571_12_2 1152 1715 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_1571_12 HRGMv2_1571_12_3 2293 3453 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1571_12 HRGMv2_1571_12_4 3450 4346 - GT2
CAZyme HRGMv2_1571_12 HRGMv2_1571_12_5 4346 5113 - GT32
pfam HRGMv2_1571_12 HRGMv2_1571_12_6 5118 5603 - Glyco_tran_28_C
pfam HRGMv2_1571_12 HRGMv2_1571_12_7 5615 6082 - Alg14
TC HRGMv2_1571_12 HRGMv2_1571_12_8 6083 6832 - 9.B.18.1.2
Gene ID: HRGMv2_1571_12_1
Type: TC
Location: 2 - 1162 (-)
Gene ID: HRGMv2_1571_12_2
Type:
Location: 1152 - 1715 (-)
Gene ID: HRGMv2_1571_12_3
Type:
Location: 2293 - 3453 (-)
Gene ID: HRGMv2_1571_12_4
Type: CAZyme
Location: 3450 - 4346 (-)
Gene ID: HRGMv2_1571_12_5
Type: CAZyme
Location: 4346 - 5113 (-)
Gene ID: HRGMv2_1571_12_6
Type: pfam
Location: 5118 - 5603 (-)
Gene ID: HRGMv2_1571_12_7
Type: pfam
Location: 5615 - 6082 (-)
Gene ID: HRGMv2_1571_12_8
Type: TC
Location: 6083 - 6832 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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