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Cluster: HRGMv2_1571_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1571_9 HRGMv2_1571_9_28 35476 37152 + 3.A.1.5.35
TC HRGMv2_1571_9 HRGMv2_1571_9_29 37309 38346 + 3.A.1.5.37
TC HRGMv2_1571_9 HRGMv2_1571_9_30 38361 39296 + 3.A.1.5.11
TC HRGMv2_1571_9 HRGMv2_1571_9_31 39299 40390 + 3.A.1.5.37
TC HRGMv2_1571_9 HRGMv2_1571_9_32 40390 41418 + 3.A.1.5.36
STP HRGMv2_1571_9 HRGMv2_1571_9_33 42163 44508 + GAF | SpoIIE
STP HRGMv2_1571_9 HRGMv2_1571_9_34 44587 45333 + STAS
CAZyme HRGMv2_1571_9 HRGMv2_1571_9_35 46261 47994 + GH13_30
Gene ID: HRGMv2_1571_9_28
Type: TC
Location: 35476 - 37152 (+)
Gene ID: HRGMv2_1571_9_29
Type: TC
Location: 37309 - 38346 (+)
Gene ID: HRGMv2_1571_9_30
Type: TC
Location: 38361 - 39296 (+)
Gene ID: HRGMv2_1571_9_31
Type: TC
Location: 39299 - 40390 (+)
Gene ID: HRGMv2_1571_9_32
Type: TC
Location: 40390 - 41418 (+)
Gene ID: HRGMv2_1571_9_33
Type: STP
Location: 42163 - 44508 (+)
Gene ID: HRGMv2_1571_9_34
Type: STP
Location: 44587 - 45333 (+)
Gene ID: HRGMv2_1571_9_35
Type: CAZyme
Location: 46261 - 47994 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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