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Cluster: HRGMv2_1571_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1571_9 HRGMv2_1571_9_10 13582 15264 + 2.A.66.4.4
pfam HRGMv2_1571_9 HRGMv2_1571_9_11 15271 17211 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1571_9 HRGMv2_1571_9_12 17577 19190 + 3.A.1.5.27
TC HRGMv2_1571_9 HRGMv2_1571_9_13 19348 20304 + 3.A.1.5.38
TC HRGMv2_1571_9 HRGMv2_1571_9_14 20308 22323 + 3.A.1.5.25
TC HRGMv2_1571_9 HRGMv2_1571_9_15 22324 23151 + 3.A.1.5.27
CAZyme HRGMv2_1571_9 HRGMv2_1571_9_16 23325 24209 + CE7
Gene ID: HRGMv2_1571_9_10
Type: TC
Location: 13582 - 15264 (+)
Gene ID: HRGMv2_1571_9_11
Type: pfam
Location: 15271 - 17211 (+)
Gene ID: HRGMv2_1571_9_12
Type: TC
Location: 17577 - 19190 (+)
Gene ID: HRGMv2_1571_9_13
Type: TC
Location: 19348 - 20304 (+)
Gene ID: HRGMv2_1571_9_14
Type: TC
Location: 20308 - 22323 (+)
Gene ID: HRGMv2_1571_9_15
Type: TC
Location: 22324 - 23151 (+)
Gene ID: HRGMv2_1571_9_16
Type: CAZyme
Location: 23325 - 24209 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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