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Cluster: HRGMv2_1570_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1570_22 HRGMv2_1570_22_17 17364 18248 - CE7
TC HRGMv2_1570_22 HRGMv2_1570_22_18 18422 19249 - 3.A.1.5.27
TC HRGMv2_1570_22 HRGMv2_1570_22_19 19250 21265 - 3.A.1.5.25
TC HRGMv2_1570_22 HRGMv2_1570_22_20 21269 22225 - 3.A.1.5.38
TC HRGMv2_1570_22 HRGMv2_1570_22_21 22383 23996 - 3.A.1.5.27
pfam HRGMv2_1570_22 HRGMv2_1570_22_22 24362 26302 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1570_22 HRGMv2_1570_22_23 26309 27991 - 2.A.66.4.4
Gene ID: HRGMv2_1570_22_17
Type: CAZyme
Location: 17364 - 18248 (-)
Gene ID: HRGMv2_1570_22_18
Type: TC
Location: 18422 - 19249 (-)
Gene ID: HRGMv2_1570_22_19
Type: TC
Location: 19250 - 21265 (-)
Gene ID: HRGMv2_1570_22_20
Type: TC
Location: 21269 - 22225 (-)
Gene ID: HRGMv2_1570_22_21
Type: TC
Location: 22383 - 23996 (-)
Gene ID: HRGMv2_1570_22_22
Type: pfam
Location: 24362 - 26302 (-)
Gene ID: HRGMv2_1570_22_23
Type: TC
Location: 26309 - 27991 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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