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Cluster: HRGMv2_1570_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1570_9 HRGMv2_1570_9_47 59516 60265 + 9.B.18.1.2
pfam HRGMv2_1570_9 HRGMv2_1570_9_48 60304 61563 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam HRGMv2_1570_9 HRGMv2_1570_9_49 61567 62040 + Alg14
CAZyme HRGMv2_1570_9 HRGMv2_1570_9_50 62053 62544 + GT1
pfam HRGMv2_1570_9 HRGMv2_1570_9_51 62541 63431 + ATPgrasp_TupA
CAZyme HRGMv2_1570_9 HRGMv2_1570_9_52 63679 64782 + GT4
NULL(UNKNOWN) HRGMv2_1570_9 HRGMv2_1570_9_53 64779 65273 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1570_9 HRGMv2_1570_9_54 65287 66210 + GT2
Gene ID: HRGMv2_1570_9_47
Type: TC
Location: 59516 - 60265 (+)
Gene ID: HRGMv2_1570_9_48
Type: pfam
Location: 60304 - 61563 (+)
Gene ID: HRGMv2_1570_9_49
Type: pfam
Location: 61567 - 62040 (+)
Gene ID: HRGMv2_1570_9_50
Type: CAZyme
Location: 62053 - 62544 (+)
Gene ID: HRGMv2_1570_9_51
Type: pfam
Location: 62541 - 63431 (+)
Gene ID: HRGMv2_1570_9_52
Type: CAZyme
Location: 63679 - 64782 (+)
Gene ID: HRGMv2_1570_9_53
Type:
Location: 64779 - 65273 (+)
Gene ID: HRGMv2_1570_9_54
Type: CAZyme
Location: 65287 - 66210 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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