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Cluster: HRGMv2_1569_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1569_13 HRGMv2_1569_13_16 16181 17065 - CE7
TC HRGMv2_1569_13 HRGMv2_1569_13_17 17239 18066 - 3.A.1.5.27
TC HRGMv2_1569_13 HRGMv2_1569_13_18 18067 20082 - 3.A.1.5.25
TC HRGMv2_1569_13 HRGMv2_1569_13_19 20086 21042 - 3.A.1.5.38
TC HRGMv2_1569_13 HRGMv2_1569_13_20 21200 22813 - 3.A.1.5.27
pfam HRGMv2_1569_13 HRGMv2_1569_13_21 23179 25119 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1569_13 HRGMv2_1569_13_22 25126 26808 - 2.A.66.4.4
Gene ID: HRGMv2_1569_13_16
Type: CAZyme
Location: 16181 - 17065 (-)
Gene ID: HRGMv2_1569_13_17
Type: TC
Location: 17239 - 18066 (-)
Gene ID: HRGMv2_1569_13_18
Type: TC
Location: 18067 - 20082 (-)
Gene ID: HRGMv2_1569_13_19
Type: TC
Location: 20086 - 21042 (-)
Gene ID: HRGMv2_1569_13_20
Type: TC
Location: 21200 - 22813 (-)
Gene ID: HRGMv2_1569_13_21
Type: pfam
Location: 23179 - 25119 (-)
Gene ID: HRGMv2_1569_13_22
Type: TC
Location: 25126 - 26808 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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