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Cluster: HRGMv2_1569_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1569_10 HRGMv2_1569_10_36 34951 35394 + 4.A.6.1.16
pfam HRGMv2_1569_10 HRGMv2_1569_10_37 35394 35675 + YajC
TC HRGMv2_1569_10 HRGMv2_1569_10_38 35712 36194 + 4.A.6.1.4
TC HRGMv2_1569_10 HRGMv2_1569_10_39 36285 37085 + 4.A.6.1.4
TC HRGMv2_1569_10 HRGMv2_1569_10_40 37075 38157 + 4.A.6.1.4
TF HRGMv2_1569_10 HRGMv2_1569_10_41 38344 39075 + GntR
STP HRGMv2_1569_10 HRGMv2_1569_10_42 39190 40356 + SIS | SIS
CAZyme HRGMv2_1569_10 HRGMv2_1569_10_43 40475 41644 + CE9
Gene ID: HRGMv2_1569_10_36
Type: TC
Location: 34951 - 35394 (+)
Gene ID: HRGMv2_1569_10_37
Type: pfam
Location: 35394 - 35675 (+)
Gene ID: HRGMv2_1569_10_38
Type: TC
Location: 35712 - 36194 (+)
Gene ID: HRGMv2_1569_10_39
Type: TC
Location: 36285 - 37085 (+)
Gene ID: HRGMv2_1569_10_40
Type: TC
Location: 37075 - 38157 (+)
Gene ID: HRGMv2_1569_10_41
Type: TF
Location: 38344 - 39075 (+)
Gene ID: HRGMv2_1569_10_42
Type: STP
Location: 39190 - 40356 (+)
Gene ID: HRGMv2_1569_10_43
Type: CAZyme
Location: 40475 - 41644 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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